DNA Replication Process in Prokaryotes

Prokaryotes have been extensively investigated in terms of DNA replication, partly due to the tiny size of their genomes and the large number of mutations that are available. 4.6 million base pairs make up a circular chromosome in the bacteria E. coli, and the entire chromosome is duplicated in around 42 minutes, starting from a single origin of replication and progressing around the circle both ways. Approximately 1000 nucleotides are added every second, according to this calculation. The technique is relatively quick and does not involve many mistakes.

During the process of DNA replication, a great number of proteins and enzymes are involved, each of which plays an important function in the process. In particular, the enzyme DNA polymerase (also known as DNA pol), which adds nucleotides one at a time to the expanding DNA chain that are complementary to the template strand, serves as an important cog in the chain-building machine. Adding nucleotides requires energy, which is obtained from nucleotides that have three phosphates linked to them, similar to how ATP has three phosphate groups attached. Nucleotides that have three phosphates attached to them are known as triphosphate nucleotides. It takes energy to break down the link between the phosphates, and that energy is then channelled towards the formation of the phosphodiester bond between the incoming nucleotide and the expanding chain. DNA polymerases are known to exist in three different forms in prokaryotes: DNA pol I, DNA pol II, and DNA pol III. In recent years, scientists have discovered that DNA pol III is the enzyme responsible for synthesis, while DNA pol I and DNA pol II are predominantly responsible for repair.

DNA Replication Steps

The following are the critical phases in the replication of genetic material:

Initiation

In order to ensure that DNA replication is successful, it must be performed with extreme precision because even the smallest error could result in mutations. As a result, DNA replication cannot begin at any location in the genome at random.

The origin of replication is a specific location that must be reached in order for replication to occur. This is the stage at which the replication process begins to unfold. The marking of this origin is followed by the unwinding of the two DNA strands, which marks the beginning of replication.

Due to the large amount of energy required, unzipping DNA strands throughout their whole length is not practical. The replication fork is formed initially, and the DNA strand is unzipped by the helicase enzyme, which catalyses the replication fork formation.

Elongation

In parallel with the separation of the strands of DNA, the polymerase enzymes begin synthesising the corresponding sequence in each strand of DNA that has been split. The parental strands will serve as a template for the synthesis of daughter strands that are produced in the future.

In addition, it should be emphasised that elongation is unidirectional, meaning that DNA is always polymerised in just one direction, from 5′ to 3′. As a result, on one strand (the template 3’5′), replication is continuous, therefore the term “continuous replication,” whereas on the other strand (the template 5’3′), replication is discontinuous, so the term “discontinuous replication.” They are found in the form of pieces known as Okazaki fragments. Later on, an enzyme known as DNA ligase links them together.

Termination

The termination of replication occurs in a variety of ways depending on which organism is being considered. Chromosomes in organisms like E.coli are round in shape. The same thing occurs when the two replication forks between the two terminals come into contact with each other.

Steps of DNA Replication In prokaryotes

• The DNA replication process is bidirectional, and it begins at a point on the DNA molecule known as the origin of replication, where it continues in both directions.

• It is at this point that enzymes unravel the double helix structure of DNA, allowing its constituent parts to be replicated.

• In order for a pair of replication forks to develop, the helix must be unwound by the helicase enzyme, and the unwound helix must be stabilised by SSB proteins and DNA isomerases.

• Primase synthesises RNA primers with a base sequence of 10 bases, which are used to trigger the synthesis of both the leading and lagging strands.

• In the 5′ to 3′ direction, DNAP III (DNA Polymerase III) continues to synthesise the leading strand. In the 5′ to 3′ direction, DNAP III (DNA Polymerase III) continues to synthesise the lagging strand, but the synthesis is terminated by the creation of Okazaki fragments.

• DNA polymerase is a type of enzyme. Removes the RNA primers with a base length of 10 bases and fills in the gap with deoxynucleotides.

• Then, using DNA ligase, the breaks between Okazaki fragments as well as the gaps around the primers are sealed, resulting in continuous strands.

• The cytoplasm of the cell is where the entire process of replication takes place.

Similarities between prokaryotic and eukaryotic reproduction

The following are the similarities between prokaryotic and eukaryotic replication that may be comprehended:

• Both the replication and nuclear division processes take place prior to nuclear division.
• The DNA involved in both processes is double-stranded, as is the DNA involved in the first.
• 5′ to 3′ replication is the direction in which the replication occurs.
• Single-strand binding proteins (SSBPs) are responsible for stabilising the unwinding DNA.
• The enzyme primase is responsible for the creation of the RNA primer.
• Both DNA replications take place in both directions.

Conclusion

DNA replication is a highly regulated biological process in which a single molecule of DNA is replicated to produce two identical DNA molecules. DNA replication is essential for the survival of all living organisms. Prokaryotic replication begins with the unwinding of DNA at the site of origin of replication. The helicase opens up the DNA-forming replication forks, which are then expanded in both directions at the same time. To prevent rewinding of the DNA around the replication fork, single-strand binding proteins wrap the DNA in the vicinity of the replication fork.