AIR20(GATE Biotech, 2017)
DBT-JRF(Category-I fellowship, 2016)
AIR19 (GATE Biotech, 2012)
AIR10 (CSIR-NET Life Sciences, 2011)

Malini Sundar Rajan

Malini Sundar Rajan explains the basics of bioinformatics for GATE (BT) and BINC aspirants.

Hindi

(Hindi) Bioinformatics for GATE (Biotechnology)

(Hindi) Overview of the course, course plan

Overview Lesson (in Hindi)

(Hindi) Introduction, History and scope of bioinformatics - Timeline of milestones in bioinformatics

Introduction, History and Scope of Bioinformatics (in Hindi)

(Hindi) Model organisms in biological sciences research - prokaryotes and unicellular eukaryotes.

Model Organisms in Biology - Part 1 (in Hindi)

(Hindi) Model organisms in biological sciences research - Multicellular Eukaryotes and Vertebrates

Model Organisms in Biology Part 2 (in Hindi)

Biological databases - primary and secondary databases, nucleotide sequence databases.

Biological Databases -Part 1 (in Hindi)

Gene expression databases, genotype, phenotype, microarray, RNA databases

Biological Databases -2 (in Hindi)

Protein sequence databases 
Protein function databases

Biological Databases -3 (in Hindi)

Pubmed central, pubmed, INSDC, Entrez, SRS, DBGET/LinkDB

Resources and Tools in Bioinformatics (in Hindi)

FASTA, GenBank, ASN.1, GCG, GDE, NBRF, PIR, IG file formats

Sequence Analysis -1 (in Hindi)

Dot plot, Local alignment, global alignment, Needleman Wunsch, Smith-Waterman, scoring matrices, BLOSUM62, PAM250, Gap penalties - constant, proportional, affine.

Sequence Analysis - 2 (in Hindi)

BLAST, FASTA, Similarity, Homology, PSI-BLAST

Sequence Analysis -3 (In Hindi)

Multiple sequence alignment, phylogeny, phylogenetic trees, Maximum Parsimony, Maximum Likelihood, Neighbor Joining, Bootstrap, Jackknife.

Sequence Analysis -4 (in Hindi)

Thermodynamics - First law, second law, third law. Annealing.

Molecular Dynamics and Simulations - 1 (in Hindi)

Molecular Mechanics, Quantum mechanics, Molecular Dynamics Simulations, software packages

Molecular Dynamics and Simulations -2 (in Hindi)

Genome, Genomics, Annotation, challenges in annotation, gene finding.

Data Mining and Analytical Tools - 1 (in Hindi)

CpG islands, Markov Chain and Hidden Markov Model

Data Mining and Analytical Tools -2 (in Hindi)

RNA secondary structure, RNA structure prediction algorithms - Nussinov Algorithm, Zuker Algorithm.

Data Mining and Analytical Tools -3 (in Hindi)

Proteome, proteomics, complexity of proteomics, post translational modifications, SDS-PAGE, Isoelectric Focussing (IEF), 2D gel electrophoresis.

Data Mining and Analytical Tools -4 (in Hindi)

Yeast two hybrid assay, mass spectrometry, de novo peptide sequencing, parts of MS.

Data Mining and Analytical Tools - 5 (in Hindi)

Previous Years bioinformatics questions from GATE BT papers

Lessons

20 lessons • 4h 6m

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Overview Lesson (in Hindi)

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Introduction, History and Scope of Bioinformatics (in Hindi)

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Model Organisms in Biology - Part 1 (in Hindi)

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Model Organisms in Biology Part 2 (in Hindi)

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Biological Databases -Part 1 (in Hindi)

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Biological Databases -2 (in Hindi)

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Biological Databases -3 (in Hindi)

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Resources and Tools in Bioinformatics (in Hindi)

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Sequence Analysis -1 (in Hindi)

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Sequence Analysis - 2 (in Hindi)

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